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| MBG4033 | Omics | 3+0+0 | ECTS:4 | | Year / Semester | Fall Semester | | Level of Course | First Cycle | | Status | Compulsory | | Department | DEPARTMENT of MOLECULAR BIOLOGY and GENETICS | | Prerequisites and co-requisites | None | | Mode of Delivery | | | Contact Hours | 14 weeks - 3 hours of lectures per week | | Lecturer | Dr. Öğr. Üyesi Cihan İNAN | | Co-Lecturer | | | Language of instruction | Turkish | | Professional practise ( internship ) | None | | | | The aim of the course: | | To understand omic technologies and the data, methods and analysis methods used in these technologies. |
| Learning Outcomes | CTPO | TOA | | Upon successful completion of the course, the students will be able to : | | | | LO - 1 : | Defines omic techniques and their differences according to each other | 5,6,7,8 | 1,3, | | LO - 2 : | Analyzes data accessed by Omic technologies | 5,6,7,8 | 1,3, | | LO - 3 : | Can develop projects in line with the knowledge gained | 5,6,7,8 | 1,3,5, | | CTPO : Contribution to programme outcomes, TOA :Type of assessment (1: written exam, 2: Oral exam, 3: Homework assignment, 4: Laboratory exercise/exam, 5: Seminar / presentation, 6: Term paper), LO : Learning Outcome | | |
| Overview of Omics Technologies, Bioinformatics - Whole Genome sequencing and combining results, Genomics - Genome Projects, Transcriptomics and its applications, Proteomics and its applications, Metabolomics and its applications, Epigenomics and its applications, Interactomics and its applications, Other omics and its applications, article presentations |
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| Course Syllabus | | Week | Subject | Related Notes / Files | | Week 1 | Overview of Omic Technologies | | | Week 2 | Bioinformatics - Whole Genome sequencing and combining results | | | Week 3 | Genomics ? Applications | | | Week 4 | Genomics ? Applications | | | Week 5 | Transcriptomics and its applications | | | Week 6 | Transcriptomics and its applications | | | Week 7 | Proteomics and its applications | | | Week 8 | Proteomics and its applications | | | Week 9 | Midterm Exam | | | Week 10 | Metagenomics and its applications | | | Week 11 | Metabolomics and its applications | | | Week 12 | Epigenomics and its applications | | | Week 13 | Interactomics and its applications | | | Week 14 | Other omics and their applications | | | Week 15 | Article presentations | | | Week 16 | Final Exam | | | |
| 1 | Barh, D., Blum, K., Madigan, M.A., Omics, Biomedical perspectives and applications, CRC Press | | | |
| Method of Assessment | | Type of assessment | Week No | Date | Duration (hours) | Weight (%) | | Mid-term exam | 9 | 9. hafta | 1 | 30 | | In-term studies (second mid-term exam) | 14 | 14. hafta | 1 | 20 | | End-of-term exam | 16 | 16. hafta | 1 | 50 | | |
| Student Work Load and its Distribution | | Type of work | Duration (hours pw) | No of weeks / Number of activity | Hours in total per term | | Yüz yüze eğitim | 3 | 14 | 42 | | Sınıf dışı çalışma | 1 | 15 | 15 | | Arasınav için hazırlık | 2 | 8 | 16 | | Arasınav | 1 | 1 | 1 | | Ödev | 1 | 13 | 13 | | Dönem sonu sınavı için hazırlık | 2.5 | 15 | 37.5 | | Dönem sonu sınavı | 1 | 1 | 1 | | Total work load | | | 125.5 |
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