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| EBK6004 | Structure Analysis and Protein Chemistry | 3+0+0 | ECTS:7.5 | | Year / Semester | Fall Semester | | Level of Course | Third Cycle | | Status | Compulsory | | Department | DEPARTMENT of BIOCHEMISTRY (PHARMACY) | | Prerequisites and co-requisites | None | | Mode of Delivery | Face to face | | Contact Hours | 14 weeks - 3 hours of lectures per week | | Lecturer | -- | | Co-Lecturer | Yrd. Doç. Dr. Sermet YILDIRMIŞ | | Language of instruction | Turkish | | Professional practise ( internship ) | None | | | | The aim of the course: | | Have knowledge about chemistry and structural analysis of protein. |
| Programme Outcomes | CTPO | TOA | | Upon successful completion of the course, the students will be able to : | | | | PO - 1 : | Amino acids can recognize and classify | 1,2,3,4 | | | PO - 2 : | Learn peptide bond formation. | 1,2,3,4 | | | PO - 3 : | Wins information about protein | 1,2,3,4 | | | PO - 4 : | Learn the physical properties of proteins. | 1,2,3,4 | | | PO - 5 : | Learn the chemical properties of proteins. | 1,2,3,4 | | | PO - 6 : | Learn the structure analysis of proteins. | 1,2,3,4 | | | CTPO : Contribution to programme outcomes, TOA :Type of assessment (1: written exam, 2: Oral exam, 3: Homework assignment, 4: Laboratory exercise/exam, 5: Seminar / presentation, 6: Term paper), PO : Learning Outcome | | |
| Information about amino acids, designation amino acids, information about proteins, metabolism and structure of protein, chemical and physical properties of proteins, structure analysis of proteins |
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| Course Syllabus | | Week | Subject | Related Notes / Files | | Week 1 | Information about amino acids
| | | Week 2 | Designation amino acids
| | | Week 3 | Classification of amino acid
| | | Week 4 | Peptide bond formation
| | | Week 5 | Information about protein
| | | Week 6 | Diversity in protein | | | Week 7 | Structure of Proteins | | | Week 8 | Primer and secondary structures | | | Week 9 | Midterm
| | | Week 10 | Tertiary structure and interactions | | | Week 11 | Rare amino acids in proteins
| | | Week 12 | Physical properties of proteins | | | Week 13 | Denatüration
| | | Week 14 | NMR- spectroscopy | | | Week 15 | Structure analysis of protein | | | Week 16 | Final Exam
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| 1 | Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts. Molecular Biology of the Cell. Peter Walter Garland Science, Sinauer Associates Inc, Sunderland. 2002. | | | |
| Method of Assessment | | Type of assessment | Week No | Date | Duration (hours) | Weight (%) | | Mid-term exam | 8 | 05.04.2016 | 1 | 50 | | End-of-term exam | 16 | 25.05.2016 | 1 | 50 | | |
| Student Work Load and its Distribution | | Type of work | Duration (hours pw) | No of weeks / Number of activity | Hours in total per term | | Yüz yüze eğitim | 3 | 14 | 42 | | Sınıf dışı çalışma | 2 | 4 | 8 | | Laboratuar çalışması | 2 | 4 | 8 | | Arasınav için hazırlık | 8 | 2 | 16 | | Arasınav | 4 | 2 | 8 | | Ödev | 2 | 2 | 4 | | Dönem sonu sınavı için hazırlık | 8 | 8 | 64 | | Dönem sonu sınavı | 3 | 1 | 3 | | Total work load | | | 153 |
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